The detailed information of tRNA gene sequence


Sequence ID>WENV170375172
Genome IDCETT01210036
Search identical group
Phylum/Class[CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 284
End posion on genome 360
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aattatttgt
tRNA gene sequence 
CGGAGCGTGGCGCAGCCTGGTAGCGCACTTCGCTGGGGGTGAAGGGGTCGGAGGTTCGAA
TCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
ttttattctt
Secondary structure (Cloverleaf model)
>WENV170375172	Pro	GGG
                   t      ACCA ttttattctt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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