The detailed information of tRNA gene sequence


Sequence ID>WENV170375642
Genome IDCETU01008269
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 226
End posion on genome 312
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttttaag
tRNA gene sequence 
GCAGAGGTCGCTTAGCCCGGTATAGCGCCGGCCTTGAAAGCCGGTGGGAATATTCCCTCG
GGGGTTCAAATCCCTCCCTCTGCGCCA
Downstream region at tRNA end position 
ccatggccag
Secondary structure (Cloverleaf model)
>WENV170375642	Ser	TGA
                   g      GCCA ccatggccag
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T T C G       G G G G G     C
    C         | | |                 T T
    G       T A G C
      G T A        G     TGGGAATATTCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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