The detailed information of tRNA gene sequence


Sequence ID>WENV170377953
Genome IDCETU01305081
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 751
End posion on genome 845
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttaaaaatac
tRNA gene sequence 
GGAAGCGGATGTTGTCCCGGTGGGCACCCCGGCCTTCAAAGCCGGTGAGGTCTGGAAACA
GGCTTGGTGGGTTCGACTCCCACACGTTTCCGCCA
Downstream region at tRNA end position 
attcttatat
Secondary structure (Cloverleaf model)
>WENV170377953	SeC	TCA
                   c      GCCA attcttatat
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    C       G T T G       G T G G G     C
    G           | |                 T T
    G       G C A C
      T G G        C     TGAGGTCTGGAAACAGGCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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