The detailed information of tRNA gene sequence


Sequence ID>WENV170378082
Genome IDCETU01335282
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 476
End posion on genome 548
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttcacttaa
tRNA gene sequence 
AAGCAATTAACTTAATTGGTAGAGTGTTTCGCTTACAACGAAATTGTTACAAGTTCAAAT
CTTGTATTGCTTAttt
Downstream region at tRNA end position 
tttacatttt
Secondary structure (Cloverleaf model)
>WENV170378082	Val	TAC
                   a      Attt tttacatttt
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T A
                    T     T G T T C     A
      T A A        A      | | | | |     A
    T       T T C A       A C A A G     C
    G       + | | |                 T T
    G       G A G T
      T A          G     TTGTT
                    T - A
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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