The detailed information of tRNA gene sequence


Sequence ID>WENV170378386
Genome IDCETV01016240
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3244
End posion on genome 3154
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggaaaaacc
tRNA gene sequence 
GGTGGGCTGGCAGAGTGGCTGAATGCAGCGGTCTTGAAAACCGCCGAAGGTTAGTAGCCT
TCCCGGGGTTCGAATCCCTGGCCCACCGCCA
Downstream region at tRNA end position 
cttttcccta
Secondary structure (Cloverleaf model)
>WENV170378386	Ser	TGA
                   c      GCCA cttttcccta
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CGAAGGTTAGTAGCCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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