The detailed information of tRNA gene sequence


Sequence ID>WENV170378588
Genome IDCETV01032254
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 114
End posion on genome 188
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgatttttt
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGGCGCGAGTTCGAG
TCTCGTCGGTCCCGCtt
Downstream region at tRNA end position 
ttggtcgatc
Secondary structure (Cloverleaf model)
>WENV170378588	Asp	GTC
                   t      GCtt ttggtcgatc
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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