The detailed information of tRNA gene sequence


Sequence ID>WENV170378603
Genome IDCETV01033344
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 272
End posion on genome 348
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaatgtaat
tRNA gene sequence 
GGCGATGTAGCTCAGTCGGTTAGAGCGCGCGCTTCATAAGCGTGAGGTCGTAGGTTCAAG
TCCCACCATCGCTACCA
Downstream region at tRNA end position 
tgttcgttac
Secondary structure (Cloverleaf model)
>WENV170378603	Met	CAT
                   t      ACCA tgttcgttac
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C A C C C     A
      T G A        A      | |   | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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