The detailed information of tRNA gene sequence


Sequence ID>WENV170379047
Genome IDCETV01083934
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 213
End posion on genome 140
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttttattatt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCAGCGTTCGCAATGCTGAGGTCAGGAGTTCGATC
CTCCTCGGCTCCACtc
Downstream region at tRNA end position 
aaataaatac
Secondary structure (Cloverleaf model)
>WENV170379047	Ala	CGC
                   t      ACtc aaataaatac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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