The detailed information of tRNA gene sequence


Sequence ID>WENV170379068
Genome IDCETV01086237
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 553
End posion on genome 476
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtgggagtag
tRNA gene sequence 
GCACCGGTGCCCGAGCGGACCAAGGGAACGGCCTGCAAAGCCGTAAAGCCGCGGGTTCAA
ATCCCGCCCGGTGCTCGA
Downstream region at tRNA end position 
cggaccgcgt
Secondary structure (Cloverleaf model)
>WENV170379068	Cys	GCA
                   g      TCGA cggaccgcgt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        A     AAAGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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