The detailed information of tRNA gene sequence


Sequence ID>WENV170379081
Genome IDCETV01086828
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 224
End posion on genome 148
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccctttggt
tRNA gene sequence 
CGGGACGTGGCGCAGCTTGGTAGCGCGCCTGGTTCGGGATCAGGAGGTCGAGAGTTCAAA
TCTCTCCGTCCCGACCA
Downstream region at tRNA end position 
tttcttattc
Secondary structure (Cloverleaf model)
>WENV170379081	Pro	CGG
                   t      ACCA tttcttattc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     A
    T       C G C G       G A G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK