The detailed information of tRNA gene sequence


Sequence ID>WENV170379230
Genome IDCETV01106371
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1163
End posion on genome 1074
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttagaaaat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGGCAACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaagaggta
Secondary structure (Cloverleaf model)
>WENV170379230	Ser	GCT
                   t      GCCA gaaagaggta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGCAACCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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