The detailed information of tRNA gene sequence


Sequence ID>WENV170379328
Genome IDCETV01117641
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 347
End posion on genome 271
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttatatttt
tRNA gene sequence 
GGCCCCGTGGTGTAGTGGCCTAACACGCCTCCCTGTCAAGGAGGAGATCGGCAGTTCGAA
TCTGCTCGGGGTCGCCA
Downstream region at tRNA end position 
ttatttggat
Secondary structure (Cloverleaf model)
>WENV170379328	Asp	GTC
                   t      GCCA ttatttggat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G T C     A
      T G A        G      + | | | |     G
    G       T G T G       G G C A G     C
    G       | | | |                 T T
    C       A C A C
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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