The detailed information of tRNA gene sequence


Sequence ID>WENV170379395
Genome IDCETV01124692
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1039
End posion on genome 955
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacgaattat
tRNA gene sequence 
GCACGGTTGACCGAGTCAGGTTAGGTAGCGGATTGCAAATCCGTGGGGTAACCCAACGCC
AGTTCGAATCTGGCACCGTGCTCCA
Downstream region at tRNA end position 
attaaagtgg
Secondary structure (Cloverleaf model)
>WENV170379395	Cys	GCA
                   t      TCCA attaaagtgg
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C G G T C     A
      T G A        G      | | | | |     G
    C       G C C A       G C C A G     C
    A         | | |                 T T
    G       A G G T
      G T T        A     GGGGTAACCCAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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