The detailed information of tRNA gene sequence


Sequence ID>WENV170379592
Genome IDCETV01138653
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 27312
End posion on genome 27225
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctaatttat
tRNA gene sequence 
GGTGACGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAAGGGCAACCTTTC
GAGAGTTCGAATCTCTCCGTCACCGCCA
Downstream region at tRNA end position 
tctatcttcc
Secondary structure (Cloverleaf model)
>WENV170379592	Ser	GGA
                   t      GCCA tctatcttcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAAGGGCAACCTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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