The detailed information of tRNA gene sequence


Sequence ID>WENV170379603
Genome IDCETV01143748
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 389
End posion on genome 307
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgattcgcc
tRNA gene sequence 
GACGCTTTGGCCGAGTGGTTAAGGCGCTCGCCTGCTAAGTGAGTGGACTTTGTCCGCAGG
GGTTCGAATCCCCTAGGCGTCGCat
Downstream region at tRNA end position 
ctttttttgt
Secondary structure (Cloverleaf model)
>WENV170379603	Ser	GCT
                   c      GCat ctttttttgt
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGACTTTGTCCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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