The detailed information of tRNA gene sequence


Sequence ID>WENV170379774
Genome IDCETV01215457
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 169
End posion on genome 253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctctattgg
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTAAAGGCGGCGCCCTGCTAAGGCGTTGGACTTCGCGTCCAC
GTGGGTTCGAATCCCACTCCCTCCGttt
Downstream region at tRNA end position 
cagttggtat
Secondary structure (Cloverleaf model)
>WENV170379774	Ser	GCT
                   g      Gttt cagttggtat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T A A        G     TGGACTTCGCGTCCAC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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