The detailed information of tRNA gene sequence


Sequence ID>WENV170379930
Genome IDCETV01256801
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 505
End posion on genome 582
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaacagt
tRNA gene sequence 
CGCGGGATAGAGCAGTCAGGTCAGCTCGCTAGGCTCATAACCTTGAGGTCGCAAGTTCAA
ATCTTGCTCCCGCTACCA
Downstream region at tRNA end position 
atttggatgt
Secondary structure (Cloverleaf model)
>WENV170379930	Met	CAT
                   t      ACCA atttggatgt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T T C     A
    C T G A        A      | | | | |     A
  A         C G A G       G C A A G     C
  G         | | | |                 T T
  G         G C T C
    T C A          G     AGGTC
                    C - G
                    T   T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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