The detailed information of tRNA gene sequence


Sequence ID>WENV170379940
Genome IDCETV01259356
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1146
End posion on genome 1233
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacgacccca
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCTCGCAAGGGCCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
agggcgctgg
Secondary structure (Cloverleaf model)
>WENV170379940	Ser	TGA
                   a      GCCA agggcgctgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCTCGCAAGGGCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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