The detailed information of tRNA gene sequence


Sequence ID>WENV170380971
Genome IDCETW01105427
Search identical group
Phylum/Class[CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 157
End posion on genome 230
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agatccattc
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTGGGTTCGATC
CCCACCAGGCCCACag
Downstream region at tRNA end position 
cgaaagagcc
Secondary structure (Cloverleaf model)
>WENV170380971	Met	CAT
                   c      ACag cgaaagagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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