The detailed information of tRNA gene sequence


Sequence ID>WENV170382192
Genome IDCETX01001229
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1221
End posion on genome 1314
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attaatattt
tRNA gene sequence 
GGAAGCGTGGGTGAGCCAGGTCGAAACCAGAAGTTTGCTAAATTTCCGTACCTTTTATAG
GGTACCATCCGTTCGAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
gctcagttag
Secondary structure (Cloverleaf model)
>WENV170382192	Ser	GCT
                   t      GCCA gctcagttag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C C G A        G      | | | | |     G
  A         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    T C G A        A     CGTACCTTTTATAGGGTACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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