The detailed information of tRNA gene sequence


Sequence ID>WENV170382306
Genome IDCETX01007881
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1606
End posion on genome 1683
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tactcctcat
tRNA gene sequence 
GCGCCATTGGTCTAGCGGTCTAGGACGCCGCCCTCTCAAGGCGGAGAATCACGGGTTCGA
ATCCCGTATGGCGTACCA
Downstream region at tRNA end position 
cctgtccggg
Secondary structure (Cloverleaf model)
>WENV170382306	Glu	CTC
                   t      ACCA cctgtccggg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AGAATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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