The detailed information of tRNA gene sequence


Sequence ID>WENV170383239
Genome IDCETX01088648
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ggcgtgactt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCAGGTAGCGCACCTGAATGGGGTTCAGGTGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tattttgaag
Secondary structure (Cloverleaf model)
>WENV170383239	Pro	GGG
                   t      ACCA tattttgaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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