The detailed information of tRNA gene sequence


Sequence ID>WENV170383473
Genome IDCETX01114374
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome -1
End posion on genome 96
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
nNNGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGGTCGCTCCCCGCTAA
TACGGGGAGGCTGGGTTCGACTCCCAGGCGCTTCCGCCAgt
Downstream region at tRNA end position 
ttgctggtta
Secondary structure (Cloverleaf model)
>WENV170383473	SeC(p)	TCA
                   n      CAgt ttgctggtta
                     n   C
                     N   G
                     N   C
                     G - C
                     A - T
                     A - T
                     G - C          C C
                    C     G C G G A     C
    C G G G        G        | + +       T
  C         G C A A       G G T T C     C
  C         |     |                 G A
  G         C C C T
    G T G G        C     TCGCTCCCCGCTAATACGGGGAGGCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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