The detailed information of tRNA gene sequence


Sequence ID>WENV170383540
Genome IDCETX01122603
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 239
End posion on genome 317
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcactggcct
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGTTTTAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGGGTTCG
AGTCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ttatccctat
Secondary structure (Cloverleaf model)
>WENV170383540	Asp	GTC
                   t      GCCA ttatccctat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T C G A        A      + | | | |     G
  G         C T C G       G C G G G     C
  G         | | | |                 T T
  T         G A G C
    T T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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