The detailed information of tRNA gene sequence


Sequence ID>WENV170384067
Genome IDCETX01217200
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 285
End posion on genome 362
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgaggggtc
tRNA gene sequence 
AGCGCTTTGGAGTAGTCAGGTCATCTCGTCGGGCTCATAACCCGGAGACCGGTAGTTCAA
ATCTACCAGGCGCTACCA
Downstream region at tRNA end position 
attattcatc
Secondary structure (Cloverleaf model)
>WENV170384067	Met	CAT
                   c      ACCA attattcatc
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A          T A
                    T     C C A T C     A
    C T G A        G      | | | | |     A
  A         T G A G       G G T A G     C
  G           | | |                 T T
  G         T C T C
    T C A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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