The detailed information of tRNA gene sequence


Sequence ID>WENV170384119
Genome IDCETX01227978
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 117
End posion on genome 43
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcgttcttT
tRNA gene sequence 
GGGCGATTAGTTAAGTGGTATAATGACGGTCTCCAAAACCGTAGTCGGGGGTTCAATTCC
CTCATCGCCCGCCC
Downstream region at tRNA end position 
tttaataaga
Secondary structure (Cloverleaf model)
>WENV170384119	Trp	CCA
                   T      GCCC tttaataaga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     A T T G       G G G G G     C
      G     | | | +                 T T
      G     T A A T
        T A        G     AGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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