The detailed information of tRNA gene sequence


Sequence ID>WENV170384176
Genome IDCETX01243416
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 489
End posion on genome 414
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatctttcaA
tRNA gene sequence 
GGGCAGATACCCAAATCCGGTCAAGGGCGCCGCCTGCAGAGCGGTTATTGGGGGTTCAAA
TCCCTCTCTGCCCTTtt
Downstream region at tRNA end position 
tttatctaga
Secondary structure (Cloverleaf model)
>WENV170384176	Cys	GCA
                   A      TTtt tttatctaga
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T A A        A      | + | | |     A
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    T C A          C     TATT
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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