The detailed information of tRNA gene sequence


Sequence ID>WENV170384254
Genome IDCETX01264685
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 440
End posion on genome 525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttttacaa
tRNA gene sequence 
AGGGAGGTGTCTGAGTGGTTTAAGGAATCAGTTTGCTAAGCTGACGTACTCTTGTAGTAC
CGAGGGTTCAAATCCCTTCCTTCCTAgat
Downstream region at tRNA end position 
aaagtttttt
Secondary structure (Cloverleaf model)
>WENV170384254	Ser	GCT
                   a      Agat aaagtttttt
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     A
    G       G T C T       G A G G G     C
    G         + | |                 T T
    T       A G G A
      T T A        A     CGTACTCTTGTAGTACC
                    T - A
                    C - G
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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