The detailed information of tRNA gene sequence


Sequence ID>WENV170384292
Genome IDCETX01273616
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 803
End posion on genome 878
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggctgtca
tRNA gene sequence 
GCCGGGGTAGCTCAACGGTTAGAGCGGCGGTTTCATAAGCCGTAGGTTGGCGGTTCAATT
CCGCCCCCCGGTACCA
Downstream region at tRNA end position 
ttactccnnn
Secondary structure (Cloverleaf model)
>WENV170384292	Met	CAT
                   a      ACCA ttactccnnn
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C C G C C     A
      C A A        A      | | | | |     A
    G       C T C G       G G C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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