The detailed information of tRNA gene sequence


Sequence ID>WENV170384350
Genome IDCETX01285154
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 630
End posion on genome 720
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgtacccgt
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCCCGCTTGGAGTGCGGGTAGGCCTGCAAAGGT
CTCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gtcttaacta
Secondary structure (Cloverleaf model)
>WENV170384350	Ser	GGA
                   t      GCCA gtcttaacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G G G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGGCCTGCAAAGGTCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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