The detailed information of tRNA gene sequence


Sequence ID>WENV170385921
Genome IDCETY01116832
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3633
End posion on genome 3546
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataattttt
tRNA gene sequence 
TTAGGTATGGCTGAGTGGCTTAAAGCGATATTTTGCTAAAATATTAGATAATAATCTTAT
CTCATTGGTTCGAATCCAATTGCCTAATagt
Downstream region at tRNA end position 
acgaaatatt
Secondary structure (Cloverleaf model)
>WENV170385921	Ser	GCT
                   t      Tagt acgaaatatt
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     T A A C C     A
      T G A        G      | | | | |     G
    G       G T C G       A T T G G     C
    G         | | |                 T T
    C       A A G C
      T T A        G     TAGATAATAATCTTATCTC
                    A - T
                    T - A
                    A - T
                    T - A
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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