The detailed information of tRNA gene sequence


Sequence ID>WENV170385923
Genome IDCETY01116832
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3444
End posion on genome 3369
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attgttaatT
tRNA gene sequence 
AAGAAAATAATTCAATTGGTTAGAATGCTAGTTTGTCAAGCTAGACGTTGCGAGTTCAAA
TCTCGTTTTTCTCGTat
Downstream region at tRNA end position 
atttatattt
Secondary structure (Cloverleaf model)
>WENV170385923	Asp	GTC
                   T      GTat atttatattt
                     A   C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     T G C T C     A
      T A A        A      + | | | |     A
    T       C T T A       G C G A G     C
    G       | | | |                 T T
    G       G A A T
      T T A        G     ACGTT
                    C - G
                    T - A
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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