The detailed information of tRNA gene sequence


Sequence ID>WENV170386180
Genome IDCETY01140720
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 269
End posion on genome 194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgttcacat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCGAGT
CCTGTCCCCGCAACTA
Downstream region at tRNA end position 
aaaaatccca
Secondary structure (Cloverleaf model)
>WENV170386180	Met	CAT
                   t      ACTA aaaaatccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        G      | + | | |     G
    T       C G A G       A T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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