The detailed information of tRNA gene sequence


Sequence ID>WENV170386506
Genome IDCETY01177047
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1256
End posion on genome 1167
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctccttcgc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCAAAGGAGCGCGCCTCGAAAGCGCGTGTGGGGGCAACCTCA
CCGTGGGTTCAAATCCCACCGCCACCGCCA
Downstream region at tRNA end position 
ttcgacgaga
Secondary structure (Cloverleaf model)
>WENV170386506	Ser	CGA
                   c      GCCA ttcgacgaga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C A A        G     TGTGGGGGCAACCTCACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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