The detailed information of tRNA gene sequence


Sequence ID>WENV170387513
Genome IDCETY01443842
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 666
End posion on genome 571
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agttactcat
tRNA gene sequence 
GGAGGTGTCCGAGCGCCTGGTGGACTCCCCCGCCTTCAAAGCGGGTGGGACGGGAGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
actgctttgg
Secondary structure (Cloverleaf model)
>WENV170387513	SeC	TCA
                   t      GCCA actgctttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       C G A G       G C G G G     C
    G         | | |                 T T
    G       A C T C
      T G G        C     TGGGACGGGAGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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