The detailed information of tRNA gene sequence


Sequence ID>WENV170387517
Genome IDCETY01444559
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1401
End posion on genome 1328
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataactttac
tRNA gene sequence 
TGTAAAGCAGAGCAATTGGTTTGTTCATCTGTTTCATCAGCAGAAAATTTTAGGTTCAAG
TCCTAACTTTGCACaaa
Downstream region at tRNA end position 
atattatttt
Secondary structure (Cloverleaf model)
>WENV170387517	Met	CAT
                   c      Caaa atattatttt
                     T - A
                     G - C
                     T + G
                     A - T
                     A - T
                     A - T
                     G - C          T G
                    C     A A T C C     A
      T A A        A      | | | | |     A
    T       C G A G       T T A G G     C
    G       | + | |                 T T
    G       G T T C
      T T T        A     AAATT
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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