The detailed information of tRNA gene sequence


Sequence ID>WENV170387546
Genome IDCETY01447763
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1874
End posion on genome 1946
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagtctttca
tRNA gene sequence 
GGGGTTATAGCTCATTTGGTAGAGCGTCTGTTTTGCATTCAGAAGGTAATCAGTTCGATT
CTGATTAATTCCAata
Downstream region at tRNA end position 
ccatcgtgct
Secondary structure (Cloverleaf model)
>WENV170387546	Ala	TGC
                   a      Aata ccatcgtgct
                     G - C
                     G - C
                     G + T
                     G + T
                     T - A
                     T - A
                     A - T          T T
                    T     T A G T C     A
      T T A        A      | | | | |     G
    T       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    T - A
                    C - G
                    T - A
                    G - C
                    T   T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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