The detailed information of tRNA gene sequence


Sequence ID>WENV170387635
Genome IDCETY01454783
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5514
End posion on genome 5597
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataattgtta
tRNA gene sequence 
AGATGATTGGGTGAGTGGTTTATACCGAAAGTTTTGAAAACTTTTATGATTTTTTCATCG
CGAGTTCAAATCTTGCATCATCTGttt
Downstream region at tRNA end position 
tatttaaatt
Secondary structure (Cloverleaf model)
>WENV170387635	Ser	TGA
                   a      Gttt tatttaaatt
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C G T T C     A
      T G A        G      | | + | |     A
    G       G T G G       G C G A G     C
    G       + | | |                 T T
    T       T A C C
      T T A        G     TATGATTTTTTCATC
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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