The detailed information of tRNA gene sequence


Sequence ID>WENV170388177
Genome IDCETZ01055351
Search identical group
Phylum/Class[CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 611
End posion on genome 535
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttaaattat
tRNA gene sequence 
GGCGAGATAGCTCAGTAGGTCAGAGCGTCGGATTCATAACCCGGAGGTCCCGAGTTCAAG
TCTCGGTCTCGCTACTA
Downstream region at tRNA end position 
ttgttctaat
Secondary structure (Cloverleaf model)
>WENV170388177	Met	CAT
                   t      ACTA ttgttctaat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     G G C T C     A
      T G A        A      | | | | |     A
    A       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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