The detailed information of tRNA gene sequence


Sequence ID>WENV170388822
Genome IDCETZ01125643
Search identical group
Phylum/Class[CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1432
End posion on genome 1506
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggaaaaaga
tRNA gene sequence 
GGCGAGGTAGCTCAGGCGGTTAGAGCGCAGGATTCATAACCCTGAGGTCATGGGTTCAAT
TCCCATCCTCGCTACtc
Downstream region at tRNA end position 
aaaaagcccc
Secondary structure (Cloverleaf model)
>WENV170388822	Met	CAT
                   a      ACtc aaaaagcccc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     T A C C C     A
      G G A        A      | | | | |     A
    C       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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