The detailed information of tRNA gene sequence


Sequence ID>WENV170388946
Genome IDCETZ01178999
Search identical group
Phylum/Class[CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 323
End posion on genome 230
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgttttat
tRNA gene sequence 
GGAAAAGTGGCAGAGCTTGGTTGAATGCAGCACCCTGCTAAGGTGTACGTCTTGAAATAT
AGGCGCAAGGGTTCAAATCCCTTCTTTTCCACCA
Downstream region at tRNA end position 
aattatagtt
Secondary structure (Cloverleaf model)
>WENV170388946	Ser	GCT
                   t      ACCA aattatagtt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
    T C G A        G      | | | | |     A
  T         G A C G       A A G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     ACGTCTTGAAATATAGGCGC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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