The detailed information of tRNA gene sequence


Sequence ID>WENV170388957
Genome IDCETZ01182378
Search identical group
Phylum/Class[CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 55
End posion on genome 125
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tagtaatatg
tRNA gene sequence 
GTAAATATAGTTTAGTGGTAAAACAGCAGTCTTCAAAATTGCCAATCAAGGTTCGAATCC
CTGTGTTTACGgga
Downstream region at tRNA end position 
tatctgcatt
Secondary structure (Cloverleaf model)
>WENV170388957	SeC	TCA
                   g      Ggga tatctgcatt
                     G - C
                     T - A
                     A - T
                     A - T
                     A - T
                     T + G
                     A - T          T A
                    T     G T C C C     A
        G A        A      | |   | |     G
      T     T T T G       C A A G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     CAAT
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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