The detailed information of tRNA gene sequence


Sequence ID>WENV170390233
Genome IDCEUA01088253
Search identical group
Phylum/Class[CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 216
End posion on genome 140
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
caagcaaggt
tRNA gene sequence 
CGGGCCGTAGCGCAGTCTGGTAGCGCACTACGCTGGGGGTGTAGGGGTCGTGGGTTCAAA
TCCCACCGGCCCGACCA
Downstream region at tRNA end position 
attttatttc
Secondary structure (Cloverleaf model)
>WENV170390233	Pro	GGG
                   t      ACCA attttatttc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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