The detailed information of tRNA gene sequence


Sequence ID>WENV170392040
Genome IDCEUA01462919
Search identical group
Phylum/Class[CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3937
End posion on genome 4009
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atatacaaca
tRNA gene sequence 
GACTCGATAGTATAATGGTTGAGTATCCCTGCCTGTCACGCAGGAGATCCGGGTTCAATC
CCCGGTTGGGTCGtcc
Downstream region at tRNA end position 
tttggtccag
Secondary structure (Cloverleaf model)
>WENV170392040	Asp	GTC
                   a      Gtcc tttggtccag
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G + T
                     A - T          C T
                    T     G G C C C     A
      T A A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      T G A        C     AGAT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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