The detailed information of tRNA gene sequence


Sequence ID>WENV170392498
Genome IDCEUB01045678
Search identical group
Phylum/Class[CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 214
End posion on genome 287
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatttttgG
tRNA gene sequence 
TGCGGATTAGCTCAGAGGAAGAGTGCCTGGCTCATAATCAGGAGGTCGTAGGATCGAAAC
CTATATCCGCATTta
Downstream region at tRNA end position 
aatgctttta
Secondary structure (Cloverleaf model)
>WENV170392498	Met	CAT
                   G      TTta aatgctttta
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          A A
                    T     T A T C C     A
        G A        A      + | | | |     G
      A     C T C G       G T A G G     C
      G     | | | +                 A T
      G     G A G T
        A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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