The detailed information of tRNA gene sequence


Sequence ID>WENV170395414
Genome IDCEUC01109878
Search identical group
Phylum/Class[CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 304
End posion on genome 228
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatcgtatt
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCAGTAGACTCATAATCTATTGGTCCGGGGTTCGAG
TCCCTGAGGGCCCACAA
Downstream region at tRNA end position 
tatggagaaa
Secondary structure (Cloverleaf model)
>WENV170395414	Met	CAT
                   t      ACAA tatggagaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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