The detailed information of tRNA gene sequence


Sequence ID>WENV170398653
Genome IDCEUD01281225
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 536
End posion on genome 463
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaatattgcc
tRNA gene sequence 
GGGGGCGTAGCATAATCCGGTTAGTGTGACCGGCTCCAGACCGGTTGATGGGGGTTCAAA
TCCCTCCGTCCCCAttt
Downstream region at tRNA end position 
tgttatcact
Secondary structure (Cloverleaf model)
>WENV170398653	Trp	CCA
                   c      Attt tgttatcact
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T A A        A      | + | | |     A
  C         T A C G       G G G G G     C
  G         + | | +                 T T
  G         G T G T
    T T A          G     TGAT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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