The detailed information of tRNA gene sequence


Sequence ID>WENV170399021
Genome IDCEUD01334344
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 677
End posion on genome 604
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttatagtagt
tRNA gene sequence 
GCGGAGGTGCCCAAGCGGCTTAAGGGGAGCGCCTGCAGAGCGTTTATTCGGGGGTTCGAA
TCCCTCCTTCCGCTttt
Downstream region at tRNA end position 
agtttctttt
Secondary structure (Cloverleaf model)
>WENV170399021	Cys	GCA
                   t      Tttt agtttctttt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T T A        G     TATTC
                    A - T
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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