The detailed information of tRNA gene sequence


Sequence ID>WENV170400265
Genome IDCEUE01089997
Search identical group
Phylum/Class[CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1094
End posion on genome 1167
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacaaccgaT
tRNA gene sequence 
TCCTCTATAGTCTAATGGTTAGGATGTGAGCCTTTCAAGCTCGAGGTTCGGGTTCAATTC
CCGGTAGAGGAATta
Downstream region at tRNA end position 
actcacatag
Secondary structure (Cloverleaf model)
>WENV170400265	Glu	TTC
                   T      ATta actcacatag
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     A - T          T T
                    T     G G C C C     A
      T A A        A      + | | | |     A
    G       T C T G       T C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGGT
                    T + G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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