The detailed information of tRNA gene sequence


Sequence ID>WENV170402297
Genome IDCEUE01367187
Search identical group
Phylum/Class[CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 457
End posion on genome 548
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaatcaaaa
tRNA gene sequence 
GGAGCGGTGGGTGAGTGGTTTAAACCAACGGGTTGCTAACTCGTCGTACGTAGCAATATG
TACCGAGAGTTCGAATCTCTCCCGCTCCGCCA
Downstream region at tRNA end position 
ttattgtcta
Secondary structure (Cloverleaf model)
>WENV170402297	Ser	GCT
                   a      GCCA ttattgtcta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTAGCAATATGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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